МикроРНК и гены, связанные с развитием ишемической болезни сердца
Ключевые слова:
miRNA, mRNA, сайты связывания, гены-мишени, ишемическая болезнь сердца.Аннотация
Изучены характеристики взаимодействия miRNA с mRNA генов, участвующих в развитии ишемической болезни сердца (ИБС). В mRNA генов, участвующих в развитии ИБС, для 2564 miRNA найдены 268 сайтов связывания miRNA в 5´UTR, CDS и 3´UTR. Для диагностики ИБС рекомендуются: ассоциации miR-1272 с генами ANGPTL2, C3 и IGFBP3; ассоциации miR-1285-5p с генами FGF2 и MMP2; ассоциации miR-3960 с геном DAB2IP. По шесть miRNA связываются с mRNA AS3MT, F2RL3, IL6R, MLXIPL, PPP1R3B и TGFB1. По семь miRNA связываются с mRNA LDLR и NPC1L1. С mRNA IL6R связывается девять miRNA. Экспрессия многих генов зависит от уникальных miRNA: miR-619-5р имеет 14 генов-мишеней, miR-5095 и miR-5096 имеют по 10 генов. Семейство miR-1273a,c,d,e,f,g,h имеет 38 сайтов связывания. mRNA IL10, IL18, IL6R сильно связываются с miR-619-5р, miR-5095 и miR-5096. В mRNA нескольких генов имеются сайты связывания miR-619-5р с miR-5585-3p. mRNA NOS1 содержит сайты связывания miR-619-5p, miR-5095, miR-1273g-3p, miR-574-5p и miR-466. miR-466 имеет множественные сайты в mRNA ICAM1, TNFSF4, MLXIPL и PLA2G7. miR-574-5p имеет множественные сайты в mRNA IGF1 и PPARA.
Библиографические ссылки
Литература
1 Trenkwalder T., Kessler T., Schunkert H., Erdmann J. Genetics of coronary artery disease: Short people at risk? // Expert Review of Cardiovascular Therapy.- 2015.- V.13(11).- P.1169-1172.
2 Arbour L., Asuri S., Whittome B., Polanco F., Hegele RA. The Genetics of Cardiovascular Disease in Canadian and International Aboriginal Populations // Can J Cardiol.- 2015.- V.31(9).- P.1094-1115.
3 Brænne I., Civelek M., Vilne B. Prediction of Causal Candidate Genes in Coronary Artery Disease Loci // Arteriosclerosis, Thrombosis, and Vascular Biology.- 2015.- V.35(10).- P.2207-2217.
4 Hamrefors V. Common genetic risk factors for coronary artery disease: new opportunities for prevention? // Clin Physiol Funct I.- 2015.- V.17.- P.128-141.
5 Cole C.B., Nikpay M., Stewart A.F., McPherson R. Increased genetic risk for obesity in premature coronary artery disease // Eur J Hum Genet.- 2016.- V.29.- P.53-69.
6 Yamada Y., Matsui K., Takeuchi I., Fujimaki T. Association of genetic variants with coronary artery disease and ischemic stroke in a longitudinal population-based genetic epidemiological study // Biomedical Reports.- 2015.- V.3(3).- P.413-419.
7 Ozaki K., Tanaka T. Molecular genetics of coronary artery disease // J Hum Genet.- 2016.- V.61.- P.71–77.
8 Neelankavil J., Rau C.D., Wang Y. The Genetic Basis of Coronary Artery Disease and Atrial Fibrillation: A Search for Disease Mechanisms and Therapeutic Targets // J Cardiothor Vasc An.- 2015.- V.29(5).- P.1328-1332.
9 Hernesniemi J.A., Lyytikäinen L.P., Oksala N., et al. Predicting sudden cardiac death using common genetic risk variants for coronary artery disease // Eur Heart J.- 2015.- V.36(26).- P.1669-1675.
10 Cheng Y., An B., Jiang M., Xin Y., Xuan S. Association of Tumor Necrosis Factor-alpha Polymorphisms and Risk of Coronary Artery Disease in Patients With Non-alcoholic Fatty Liver Disease // Hepat Mon. – 2015.- V.15(3).- P.e26818.
11 Liao B., Cheng K., Dong S., Liu H., Xu Z. Effect of apolipoprotein A1 genetic polymorphisms on lipid profiles and the risk of coronary artery disease // Diagn Pathol.- 2015.- V.10.- P.102.
12 Cui F., Li K., Li Y., Zhang X., An C. Apolipoprotein C3 genetic polymorphisms are associated with lipids and coronary artery disease in a Chinese population // Lipids Health Dis.- 2014.- V.13.- P.170.
13 Arslan S., Korkmaz Ö., Özbilüm N., Berkan Ö. Association between NF-κBI and NF-κBIA polymorphisms and coronary artery disease // Biomedical Reports.- 2015.- V.3(5).- P.736-740.
14 Ahmadi Z., Senemar S., Toosi S., Radmanesh S. The Association of Lipoprotein Lipase Genes, HindIII and S447X Polymorphisms With Coronary Artery Disease in Shiraz City // Jounal of Cardiovascular and Thoracic Research.- 2015.- V.7(2).- P.63-67.
15 Xiao J., Luo X., Lin H., Zhang Y., Lu Y., Wang N., Zhang Y., Yang B., Wang Z. MicroRNA miR-133 represses HERG K+ channel expression contributing to QT prolongation in diabetic hearts // J Biol Chem.- 2011.- V.282(17).- P.12363-12367.
16 Shan H., Zhang Y., Cai B., et al. Upregulation of microRNA-1 and microRNA-133 contributes to arsenic-induced cardiac electrical remodeling // Int J Cardiol.- 2013.- V.167(6).- P.2798-2805.
17 Luo X., Lin H., Pan Z., Xiao J., Zhang Y., Lu Y., Yang B., Wang Z. Down-regulation of miR-1/miR-133 contributes to re-expression of pacemaker channel genes HCN2 and HCN4 in hypertrophic heart // J Biol Chem.- 2008.- V.283(29).- P.20045-20052.
18 Wang N., Zhou Z., Liao X., Zhang T. Role of microRNAs in cardiac hypertrophy and heart failure // International Union of Biochemistry and Molecular Biology Life.- 2009.- V.61(6).- P.566-571.
19 Ye Y., Perez-Polo J.R., Qian J., Birnbaum Y. The role of microRNA in modulating myocardial ischemia-reperfusion injury // Physiol Genomics.- 2011.- V.43(10).- P.534-542.
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21 Papoutsidakis N., Deftereos S., Kaoukis A., Bouras G., Giannopoulos G., Theodorakis A., Angelidis C., Hatzis G., Stefanadis C. MicroRNAs and the heart: small things do matter // Curr Top Med Chem.- 2013.- V.13(2).- P.216-230.
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37 Yin C., Salloum F.N., Kukreja R.C. A novel role of microRNA in late preconditioning: upregulation of endothelial nitric oxide synthase and heat shock protein 70 // Circ Res.- 2009.- V.104(5).- P.572-575.
38 Иващенко А.Т., Атамбаева Ш.А., Ниязова Р.Е., Пинский И.В. Гены, связанные с развитием ишемической болезни сердца // Вестник КазНУ, серия биологическая.- 2015.- №3 (65). - C. 100-108.
39 Ivashchenko A., Berillo O., Pyrkova A., Niyazova R. Binding Sites of miR-1273 Family on the mRNA of Target Genes // Biomed Research International.- 2014.- V.2014.- P.1-11.
40 Ivashchenko A., Berillo O., Pyrkova A., Niyazova R., Atambayeva S. The properties of binding sites of miR-619-5p, miR-5095, miR-5096 and miR-5585-3p in the mRNAs of human genes // Biomed Research International.- 2014.- V.2014.- P.1-8.
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43 Атамбаева С., Ниязова Р.Е., Берилло О., Иващенко А.Т. Особенности сайтов связывания mir-574-5р и mir-574-3р с mrna генов-мишеней // Вестник КазНУ, биологическая серия.- 2015.- №1(63).- С.349-354.
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1 Trenkwalder T., Kessler T., Schunkert H., Erdmann J. Genetics of coronary artery disease: Short people at risk? // Expert Review of Cardiovascular Therapy.- 2015.- V.13(11).- P.1169-1172.
2 Arbour L., Asuri S., Whittome B., Polanco F., Hegele RA. The Genetics of Cardiovascular Disease in Canadian and International Aboriginal Populations // Can J Cardiol.- 2015.- V.31(9).- P.1094-1115.
3 Brænne I., Civelek M., Vilne B. Prediction of Causal Candidate Genes in Coronary Artery Disease Loci // Arteriosclerosis, Thrombosis, and Vascular Biology.- 2015.- V.35(10).- P.2207-2217.
4 Hamrefors V. Common genetic risk factors for coronary artery disease: new opportunities for prevention? // Clin Physiol Funct I.- 2015.- V.17.- P.128-141.
5 Cole C.B., Nikpay M., Stewart A.F., McPherson R. Increased genetic risk for obesity in premature coronary artery disease // Eur J Hum Genet.- 2016.- V.29.- P.53-69.
6 Yamada Y., Matsui K., Takeuchi I., Fujimaki T. Association of genetic variants with coronary artery disease and ischemic stroke in a longitudinal population-based genetic epidemiological study // Biomedical Reports.- 2015.- V.3(3).- P.413-419.
7 Ozaki K., Tanaka T. Molecular genetics of coronary artery disease // J Hum Genet.- 2016.- V.61.- P.71–77.
8 Neelankavil J., Rau C.D., Wang Y. The Genetic Basis of Coronary Artery Disease and Atrial Fibrillation: A Search for Disease Mechanisms and Therapeutic Targets // J Cardiothor Vasc An.- 2015.- V.29(5).- P.1328-1332.
9 Hernesniemi J.A., Lyytikäinen L.P., Oksala N., et al. Predicting sudden cardiac death using common genetic risk variants for coronary artery disease // Eur Heart J.- 2015.- V.36(26).- P.1669-1675.
10 Cheng Y., An B., Jiang M., Xin Y., Xuan S. Association of Tumor Necrosis Factor-alpha Polymorphisms and Risk of Coronary Artery Disease in Patients With Non-alcoholic Fatty Liver Disease // Hepat Mon. – 2015.- V.15(3).- P.e26818.
11 Liao B., Cheng K., Dong S., Liu H., Xu Z. Effect of apolipoprotein A1 genetic polymorphisms on lipid profiles and the risk of coronary artery disease // Diagn Pathol.- 2015.- V.10.- P.102.
12 Cui F., Li K., Li Y., Zhang X., An C. Apolipoprotein C3 genetic polymorphisms are associated with lipids and coronary artery disease in a Chinese population // Lipids Health Dis.- 2014.- V.13.- P.170.
13 Arslan S., Korkmaz Ö., Özbilüm N., Berkan Ö. Association between NF-κBI and NF-κBIA polymorphisms and coronary artery disease // Biomedical Reports.- 2015.- V.3(5).- P.736-740.
14 Ahmadi Z., Senemar S., Toosi S., Radmanesh S. The Association of Lipoprotein Lipase Genes, HindIII and S447X Polymorphisms With Coronary Artery Disease in Shiraz City // Jounal of Cardiovascular and Thoracic Research.- 2015.- V.7(2).- P.63-67.
15 Xiao J., Luo X., Lin H., Zhang Y., Lu Y., Wang N., Zhang Y., Yang B., Wang Z. MicroRNA miR-133 represses HERG K+ channel expression contributing to QT prolongation in diabetic hearts // J Biol Chem.- 2011.- V.282(17).- P.12363-12367.
16 Shan H., Zhang Y., Cai B., et al. Upregulation of microRNA-1 and microRNA-133 contributes to arsenic-induced cardiac electrical remodeling // Int J Cardiol.- 2013.- V.167(6).- P.2798-2805.
17 Luo X., Lin H., Pan Z., Xiao J., Zhang Y., Lu Y., Yang B., Wang Z. Down-regulation of miR-1/miR-133 contributes to re-expression of pacemaker channel genes HCN2 and HCN4 in hypertrophic heart // J Biol Chem.- 2008.- V.283(29).- P.20045-20052.
18 Wang N., Zhou Z., Liao X., Zhang T. Role of microRNAs in cardiac hypertrophy and heart failure // International Union of Biochemistry and Molecular Biology Life.- 2009.- V.61(6).- P.566-571.
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