Binding of microRNAs with mRNAs of Growth Regulating Transcription Factors Genes in Arabidopsis, Rice and Maize
73 46
Keywords:
miRNA, mRNA, miR396, plantAbstract
The interaction of microRNAs with mRNAs of growth regulating transcription factors in arabidopsis, rice and corn is studied. It was found that among 338 miRNAs in arabidopsis only ath-miR396 family efficiently bound to GRF mRNAs. It was revealed that among 661 rice miRNAs all nine members of osa-miR396 family bound to mRNAs of nine growth regulatory factors with high specificity. It was found that all eight members of zma-miR396 family out of 321 corn miRNAs bound to 36 mRNAs of growth regulating factors with high specificityReferences
1. Ding Y., Tao Y., Zhu C. Emerging roles of microRNAs in the mediation of drought stress response in plants // J.Exp. Bot. – 2013. doi: 10.1093/jxb/ert164
2. Hauser F., Chen W., Deinlein U., Chang K., Ossowski S., Fitz J., Hannon G..J., Schroeder J.I. A
genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis
// Plant Cell . - 2013. - V.25. - P. 2848-2863.
3. Hwang D-G, Park J.H., Lim J.Y., Kim D., Choi Y., et al. The hot pepper (Capsicum annuum) microRNA
transcriptome reveals novel and conserved targets: a foundation for understanding microRNA functional roles in hot
pepper // PLoS ONE. – 2013. - V. 8, N.5. doi:10.1371/journal.pone.00642
4. Hwang E.-W., Shin S.-J., Kwon H.-B. Identification of microRNAs and their putative targets that respond to drought
stress in Solanum tuberosum // J. Korean Soc. Appl. Biol. Chem. – 2011. - V. 54. - P. 317-324.
5. Xia R., Zhu H., An Y.-G., Beers E.P., Liu Z. Apple miRNAs and tasiRNAs with novel regulatory networks //Genome Biology. – 2012. - V. 13. - P. 47-51
6. Haga N., Kato K., Murase M., Araki S., Kubo M., Demura T., Suzuki K., Muller I., Voss U., Jurgens G. et al. //
R1R2R3-Myb proteins positively regulate cytokinesis through activation of KNOLLE transcription in Arabidopsis
thaliana. Development - 2007. - V.134. - P.1101-1110.
7. Horiguchi G., Kim G. T. and Tsukaya H. The transcription factor AtGRF5 and the transcription coactivator AN3
regulate cell proliferation in leaf primordia of Arabidopsis thaliana // Plant J. - 2005. - V. 43. - P. 68-78.
8. Kim J. H. and Lee B. H. Growth-regulating factor 4 of Arabidopsis thaliana is required for development of leaves,
cotyledons, and shoot apical meristem // J. Plant Biol. - 2006. - V. 49. - P.463-468.
9. Kim J. H., Choi D., Kende H. The AtGRF family of putative transcription factors is involved in leaf and cotyledon
growth in Arabidopsis // Plant J. - 2003. - V. 36. - P. 94-104.
10. Kim J. H. and Kende H. A transcriptional coactivator, AtGIF1, is involved in regulating leaf growth and
morphology in Arabidopsis // Proc. Natl. Acad. Sci. USA. - 2004. - V.101. - P. 13374-13379.
11. Rodriguez R.E., Mecchia M.A., Debernardi J.M., Schommer C., Weigel D., Palatnik J.F. Control of cell
proliferation in Arabidopsis thaliana by microRNA miR396 // Development. - 2010. - V. 137. - P. 103-12
.
12. Liu D., Song Y., Chen Z. and Yu D. Ectopic expression of miR396 suppresses GRF target gene expression and
alters leaf growth in Arabidopsis // Physiol. Plant. - 2009. - V. 136. - P. 223-236.
13. Minorsky P.V. Syncytium formation by cyst nematodes: involvement of a microRNA // Plant Physiology. -
2012. - V. 159. - P. 1-2.
2. Hauser F., Chen W., Deinlein U., Chang K., Ossowski S., Fitz J., Hannon G..J., Schroeder J.I. A
genomic-scale artificial microRNA library as a tool to investigate the functionally redundant gene space in Arabidopsis
// Plant Cell . - 2013. - V.25. - P. 2848-2863.
3. Hwang D-G, Park J.H., Lim J.Y., Kim D., Choi Y., et al. The hot pepper (Capsicum annuum) microRNA
transcriptome reveals novel and conserved targets: a foundation for understanding microRNA functional roles in hot
pepper // PLoS ONE. – 2013. - V. 8, N.5. doi:10.1371/journal.pone.00642
4. Hwang E.-W., Shin S.-J., Kwon H.-B. Identification of microRNAs and their putative targets that respond to drought
stress in Solanum tuberosum // J. Korean Soc. Appl. Biol. Chem. – 2011. - V. 54. - P. 317-324.
5. Xia R., Zhu H., An Y.-G., Beers E.P., Liu Z. Apple miRNAs and tasiRNAs with novel regulatory networks //Genome Biology. – 2012. - V. 13. - P. 47-51
6. Haga N., Kato K., Murase M., Araki S., Kubo M., Demura T., Suzuki K., Muller I., Voss U., Jurgens G. et al. //
R1R2R3-Myb proteins positively regulate cytokinesis through activation of KNOLLE transcription in Arabidopsis
thaliana. Development - 2007. - V.134. - P.1101-1110.
7. Horiguchi G., Kim G. T. and Tsukaya H. The transcription factor AtGRF5 and the transcription coactivator AN3
regulate cell proliferation in leaf primordia of Arabidopsis thaliana // Plant J. - 2005. - V. 43. - P. 68-78.
8. Kim J. H. and Lee B. H. Growth-regulating factor 4 of Arabidopsis thaliana is required for development of leaves,
cotyledons, and shoot apical meristem // J. Plant Biol. - 2006. - V. 49. - P.463-468.
9. Kim J. H., Choi D., Kende H. The AtGRF family of putative transcription factors is involved in leaf and cotyledon
growth in Arabidopsis // Plant J. - 2003. - V. 36. - P. 94-104.
10. Kim J. H. and Kende H. A transcriptional coactivator, AtGIF1, is involved in regulating leaf growth and
morphology in Arabidopsis // Proc. Natl. Acad. Sci. USA. - 2004. - V.101. - P. 13374-13379.
11. Rodriguez R.E., Mecchia M.A., Debernardi J.M., Schommer C., Weigel D., Palatnik J.F. Control of cell
proliferation in Arabidopsis thaliana by microRNA miR396 // Development. - 2010. - V. 137. - P. 103-12
.
12. Liu D., Song Y., Chen Z. and Yu D. Ectopic expression of miR396 suppresses GRF target gene expression and
alters leaf growth in Arabidopsis // Physiol. Plant. - 2009. - V. 136. - P. 223-236.
13. Minorsky P.V. Syncytium formation by cyst nematodes: involvement of a microRNA // Plant Physiology. -
2012. - V. 159. - P. 1-2.
Downloads
How to Cite
Pinskiy, I. V., Sagaydak, A. I., Orazova, S. B., Pyrkova, A. J., & Ivashсhenko A. T. (2015). Binding of microRNAs with mRNAs of Growth Regulating Transcription Factors Genes in Arabidopsis, Rice and Maize. Experimental Biology, 59(3/1), 285–288. Retrieved from https://bb.kaznu.kz/index.php/biology/article/view/775
Issue
Section
Physical and chemical biology and nanotechnologies
